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European schoolchildren spent on average 65% of their time at school in sedentary activities and 5% on moderate to vigorous intensity activities, with small differences between countries. Girls spent somewhat more school-time in sedentary activities than boys, and spent less time in moderate to vigorous intensity activities. Overweight children spent significantly less time in moderate to vigorous intensity activities than normal weight children. Parental education or ethnicity were not associated with time spent in sedentary or physical activities. European schoolchildren thus spend a small amount of their school-time in moderate to vigorous intensity activities and a large amount in sedentary activities, with small but significant differences across countries.